Motif IL_12821.1 Version IL_12821.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 1-16 | 2-15 | 6-12 | 9-10 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5AJ0_172 | 5AJ0 | 0 | 1 | A2 | LSU rRNA | G | 4847 | G | 4848 | G | 4849 | A | 4850 | A | 4851 | A | 4852 | C | 4853 | G | 4854 | G | 4855 | * | C | 4881 | C | 4882 | U | 4883 | G | 4885 | C | 4886 | C | 4887 | C | 4888 | cWW | cWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGGAAACGG*CCUCGCCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGAAACG*CUCGCC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-L-R-R-R-R-L-L-L-L-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: