Motif IL_13910.1 Version IL_13910.1 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 3-7 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9PN5_181 | 9PN5 | 0.8763 | 3 | B5 | SSU rRNA | G | 819 | U | 821 | U | 822 | G | 824 | * | C | 848 | C | 849 | U | 851 | C | 852 | ncWW | cWW | |
| 2 | IL_9PN5_167 | 9PN5 | 0.0000 | 3 | B5 | SSU rRNA | G | 480 | A | 481 | U | 482 | C | 484 | * | G | 503 | U | 504 | U | 507 | U | 508 | cWW | cWW | |
| 3 | IL_6JXM_002 | 6JXM | 0.5922 | 1 | B | tRNA | U | 50 | G | 51 | G | 52 | G | 53 | * | C | 35 | G | 36 | A | 38 | G | 39 | cWW | tSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUUGG*CCAUC | 1 |
| GAUAC*GUAAUU | 1 |
| UGGG*CGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUUG*CAU | 1 |
| AUA*UAAU | 1 |
| GG*GAA | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-R-L-R-cWW
- Heat map statistics
- Min 0.59 | Avg 0.54 | Max 0.94
Coloring options: