Motif IL_15043.1 Version IL_15043.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8GLP_337 | 8GLP | 0.4065 | 1 | S2 | SSU rRNA | OMG | 1447 | A | 1448 | G | 1449 | G | 1450 | * | C | 1395 | A | 1396 | G | 1398 | C | 1399 | cWW | cWW | cWH | cWW |
| 2 | IL_7WIE_001 | 7WIE | 0.2766 | 0 | V | THF-II riboswitch (folE RNA) | G | 49 | A | 50 | G | 51 | A | 52 | * | U | 10 | G | 11 | G | 12 | U | 13 | cWW | cWW | cWH | cWW |
| 3 | IL_8CRE_401 | 8CRE | 0.0000 | 0 | CM | SSU rRNA | C | 147 | C | 148 | G | 149 | U | 150 | * | A | 160 | G | 161 | A | 162 | G | 163 | cWW | ncWWa | cWH | cWW |
| 4 | IL_8GLP_277 | 8GLP | 0.2870 | 1 | S2 | SSU rRNA | A | 1822 | A | 1823 | A | 1824 | G | 1826 | * | C | 1708 | G | 1709 | C | 1710 | U | 1711 | cWW | cWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| (OMG)AGG*CAUGC | 1 |
| GAGA*UGGU | 1 |
| CCGU*AGAG | 1 |
| AAAAG*CGCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AG*AUG | 1 |
| AG*GG | 1 |
| CG*GA | 1 |
| AAA*GC | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-cWW-cWH-cWW
- Heat map statistics
- Min 0.28 | Avg 0.28 | Max 0.49
Coloring options: