Motif IL_16252.1 Version IL_16252.1 of this group appears in releases 0.6 to 0.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5F_054 | 3U5F | 0.0000 | 3 | 6 | SSU rRNA | C | 1034 | G | 1035 | A | 1036 | * | U | 1095 | U | 1097 | U | 1099 | G | 1101 | cWW | cWW |
| 2 | IL_2XZM_050 | 2XZM | 0.4494 | 3 | A | SSU rRNA | C | 1012 | G | 1013 | A | 1014 | * | U | 1067 | U | 1069 | U | 1071 | G | 1073 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGA*UCUUUGG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*CUUUG | 2 |
Release history
| Release | 0.6 |
|---|---|
| Date | 2012-04-02 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_16252.1 | Only in the parent motif |
|---|---|---|---|
| IL_92311.1 Compare | IL_2XZM_050 | IL_3U5F_054 |
Children motifs
| Child motif | Common motif instances | Only in IL_16252.1 | Only in the child motif |
|---|---|---|---|
| IL_16252.2 Compare | IL_3U5F_054, IL_2XZM_050 | IL_2ZJR_023 |
- Annotations
-
- (2)
- Basepair signature
- 07_cWW--cWW
- Heat map statistics
- Min 0.45 | Avg 0.22 | Max 0.45
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