#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name for chain 1 2 3break 4 51-53-4
1 IL_4R4V_0054R4V0.91571Intercalated cWSAVS ribozyme RNAU719A720G722*C755A756cWWcWW
2 IL_8HBA_0038HBA0.07680BRNA (55-MER)C32G33G34*C5G6cWWcWW
3 IL_8I3Z_0018I3Z0.07950B+ARNA (31-MER)C32G33G34*C5G6cWWcWW
4 IL_8GXB_0018GXB0.00000ANAD+ II riboswitchC40G41G42*C5G6cWWcWW
5 IL_8GXB_0038GXB0.10320BNAD+ II riboswitchC40G41G42*C5G6cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGG*CG4
UAAG*CA1
Non-Watson-Crick part of the motif
SequenceCounts
G*4
AA*1

Release history

Release3.903.913.92
Date2024-11-062024-12-042025-01-01
StatusUpdated, 2 parentsExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Intercalated cWS (1)
  • Basepair signature
    cWW-L-cWW
    Heat map statistics
    Min 0.07 | Avg 0.34 | Max 0.95
    Help

    Coloring options:

    IL_4R4V_005:IL_4R4V_005 = 0IL_4R4V_005:IL_8HBA_003 = 0.9145IL_4R4V_005:IL_8I3Z_001 = 0.9237IL_4R4V_005:IL_8GXB_001 = 0.9157IL_4R4V_005:IL_8GXB_003 = 0.9452IL_8HBA_003:IL_4R4V_005 = 0.9145IL_8HBA_003:IL_8HBA_003 = 0IL_8HBA_003:IL_8I3Z_001 = 0.0733IL_8HBA_003:IL_8GXB_001 = 0.0768IL_8HBA_003:IL_8GXB_003 = 0.1434IL_8I3Z_001:IL_4R4V_005 = 0.9237IL_8I3Z_001:IL_8HBA_003 = 0.0733IL_8I3Z_001:IL_8I3Z_001 = 0IL_8I3Z_001:IL_8GXB_001 = 0.0795IL_8I3Z_001:IL_8GXB_003 = 0.1074IL_8GXB_001:IL_4R4V_005 = 0.9157IL_8GXB_001:IL_8HBA_003 = 0.0768IL_8GXB_001:IL_8I3Z_001 = 0.0795IL_8GXB_001:IL_8GXB_001 = 0IL_8GXB_001:IL_8GXB_003 = 0.1032IL_8GXB_003:IL_4R4V_005 = 0.9452IL_8GXB_003:IL_8HBA_003 = 0.1434IL_8GXB_003:IL_8I3Z_001 = 0.1074IL_8GXB_003:IL_8GXB_001 = 0.1032IL_8GXB_003:IL_8GXB_003 = 0IL_4R4V_005IL_8HBA_003IL_8I3Z_001IL_8GXB_001IL_8GXB_003Discrepancy0.000.200.400.600.80
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