#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 51-53-4
1 IL_8GXB_0038GXB0.10320BNAD+ II riboswitchC40G41G42*C5G6cWWcWW
2 IL_8GXB_0018GXB0.00000ANAD+ II riboswitchC40G41G42*C5G6cWWcWW
3 IL_8HBA_0038HBA0.07680BRNA (55-MER)C32G33G34*C5G6cWWcWW
4 IL_8I3Z_0018I3Z0.07950B+ARNA (31-MER)C32G33G34*C5G6cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGG*CG4
Non-Watson-Crick part of the motif
SequenceCounts
G*4

Release history

Release3.933.943.953.963.973.98
Date2025-01-292025-02-262025-03-262025-04-232025-05-212025-06-18
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-L-cWW
    Heat map statistics
    Min 0.07 | Avg 0.07 | Max 0.14
    Help

    Coloring options:

    IL_8GXB_003:IL_8GXB_003 = 0IL_8GXB_003:IL_8GXB_001 = 0.1032IL_8GXB_003:IL_8HBA_003 = 0.1434IL_8GXB_003:IL_8I3Z_001 = 0.1074IL_8GXB_001:IL_8GXB_003 = 0.1032IL_8GXB_001:IL_8GXB_001 = 0IL_8GXB_001:IL_8HBA_003 = 0.0768IL_8GXB_001:IL_8I3Z_001 = 0.0795IL_8HBA_003:IL_8GXB_003 = 0.1434IL_8HBA_003:IL_8GXB_001 = 0.0768IL_8HBA_003:IL_8HBA_003 = 0IL_8HBA_003:IL_8I3Z_001 = 0.0733IL_8I3Z_001:IL_8GXB_003 = 0.1074IL_8I3Z_001:IL_8GXB_001 = 0.0795IL_8I3Z_001:IL_8HBA_003 = 0.0733IL_8I3Z_001:IL_8I3Z_001 = 0IL_8GXB_003IL_8GXB_001IL_8HBA_003IL_8I3Z_001Discrepancy0.000.020.040.060.080.100.120.14
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