Motif IL_17628.1 Version IL_17628.1 of this group appears in releases 3.18 to 3.18
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 2-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_009 | 5J7L | 0.0000 | 0 | Isolated non-canonical cWW pair | AA | G | 128 | A | 129 | A | 130 | A | 131 | * | U | 231 | G | 232 | C | 233 | cWW | cWW | cWW |
| 2 | IL_5TBW_132 | 5TBW | 0.9900 | 2 | Isolated non-canonical cWW pair | 1 | U | 3373 | U | 3374 | A | 3375 | C | 3378 | * | G | 3328 | U | 3329 | A | 3330 | cWW | cwW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAA*UGC | 1 |
| UUAAGC*GUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA*G | 1 |
| UAAG*U | 1 |
Release history
| Release | 3.18 |
|---|---|
| Date | 2019-05-03 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Isolated non-canonical cWW pair (2)
- Basepair signature
- cWW-cWW-L-cWW
- Heat map statistics
- Min 0.99 | Avg 0.50 | Max 0.99
Coloring options: