Motif IL_17790.1 Version IL_17790.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 1-12 | 10-11 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3NPQ_004 | 3NPQ | 0.0000 | 0 | A | SAH (S-adenosyl-L-homocysteine) riboswitch aptamer | G | 7 | G | 8 | A | 9 | G | 10 | C | 11 | G | 12 | C | 13 | U | 14 | G | 15 | C | 16 | * | G | 31 | C | 32 | cWW | cWW |
| 2 | IL_7LYF_003 | 7LYF | 0.9602 | 1 | A | Dengue virus SLA | G | 73 | A | 75 | G | 76 | C | 77 | U | 78 | A | 79 | A | 80 | G | 81 | C | 82 | U | 83 | * | A | 49 | C | 50 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAGCGCUGC*GC | 1 |
| GGAGCUAAGCU*AC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGCGCUG* | 1 |
| GAGCUAAGC* | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-cWW-L-L-R-L-R-L-R
- Heat map statistics
- Min 0.96 | Avg 0.48 | Max 0.96
Coloring options: