Motif IL_19268.1 Version IL_19268.1 of this group appears in releases 1.17 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2PXV_001 | 2PXV | 0.4827 | 3 | B | 4.5 S RNA | U | 139 | C | 142 | G | 144 | * | C | 167 | A | 168 | A | 169 | cWW | cWW |
| 2 | IL_1S72_016 | 1S72 | 0.0000 | 3 | 0 | LSU rRNA | U | 548 | A | 551 | G | 553 | * | C | 606 | G | 607 | A | 608 | cWW | cWW |
| 3 | IL_2AW7_068 | 2AW7 | 0.3946 | 1 | A | 16S ribosomal RNA | U | 1445 | A | 1446 | C | 1448 | * | G | 1455 | A | 1456 | G | 1457 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UACCAG*CAA | 1 |
| UACAAG*CGA | 1 |
| UAAC*GAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACCA*A | 1 |
| ACAA*G | 1 |
| AA*A | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in IL_19268.1 | Only in the parent motif |
|---|---|---|---|
| IL_01080.2 Compare | IL_2PXV_001, IL_1S72_016, IL_2AW7_068 | IL_3TD1_005, IL_1FJG_057 |
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-R-cWW
- Heat map statistics
- Min 0.39 | Avg 0.32 | Max 0.56
Coloring options: