#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4 5 6break 7 8 9 101-102-33-75-96-7
1 IL_3U5H_0683U5H0.000005 LSU rRNAG1500U1501C1502A1503A1504C1505*G1513G1514A1515C1516cWWncSHtWHcWScWW
2 IL_4CUV_0694CUV0.127501 LSU rRNAG1500U1501C1502A1503A1504C1505*G1513G1514A1515C1516cWWtWHcWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUCAAC*GGAC2
Non-Watson-Crick part of the motif
SequenceCounts
UCAA*GA2

Release history

Release1.15
Date2014-06-20
StatusNew id, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_19451.1Only in the parent motif
IL_06471.1
Compare
IL_3U5H_068IL_4CUV_069

Children motifs

Child motifCommon motif instancesOnly in IL_19451.1Only in the child motif
IL_59276.1
Compare
IL_4CUV_069, IL_3U5H_068IL_1VX6_068, IL_3J7A_022, IL_3U5F_025
Annotations
  • (2)
  • Basepair signature
    cWW-cSW-tWH-cSH-L-cWS-R-cWW
    Heat map statistics
    Min 0.13 | Avg 0.06 | Max 0.13
    Help

    Coloring options:

    IL_3U5H_068:IL_3U5H_068 = 0IL_3U5H_068:IL_4CUV_069 = 0.1275IL_4CUV_069:IL_3U5H_068 = 0.1275IL_4CUV_069:IL_4CUV_069 = 0IL_3U5H_068IL_4CUV_069Discrepancy0.000.020.040.060.080.100.12
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