Motif IL_19451.1 Version IL_19451.1 of this group appears in releases 1.15 to 1.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-10 | 2-3 | 3-7 | 5-9 | 6-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5H_068 | 3U5H | 0.0000 | 0 | 5 | LSU rRNA | G | 1500 | U | 1501 | C | 1502 | A | 1503 | A | 1504 | C | 1505 | * | G | 1513 | G | 1514 | A | 1515 | C | 1516 | cWW | ncSH | tWH | cWS | cWW |
| 2 | IL_4CUV_069 | 4CUV | 0.1275 | 0 | 1 | LSU rRNA | G | 1500 | U | 1501 | C | 1502 | A | 1503 | A | 1504 | C | 1505 | * | G | 1513 | G | 1514 | A | 1515 | C | 1516 | cWW | tWH | cWS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCAAC*GGAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCAA*GA | 2 |
Release history
| Release | 1.15 |
|---|---|
| Date | 2014-06-20 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_19451.1 | Only in the parent motif |
|---|---|---|---|
| IL_06471.1 Compare | IL_3U5H_068 | IL_4CUV_069 |
Children motifs
| Child motif | Common motif instances | Only in IL_19451.1 | Only in the child motif |
|---|---|---|---|
| IL_59276.1 Compare | IL_4CUV_069, IL_3U5H_068 | IL_1VX6_068, IL_3J7A_022, IL_3U5F_025 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cSW-tWH-cSH-L-cWS-R-cWW
- Heat map statistics
- Min 0.13 | Avg 0.06 | Max 0.13
Coloring options: