Motif IL_19687.1 Version IL_19687.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 4-7 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8D29_007 | 8D29 | 0.0000 | 1 | J | RNA (34-MER) | C | 21 | C | 23 | U | 24 | U | 25 | G | 26 | * | C | 9 | A | 10 | G | 11 | ncWW | ncWW | ncWW | |
| 2 | IL_4R4V_006 | 4R4V | 0.6401 | 0 | Isolated non-canonical cWW pair | A | VS ribozyme RNA | G | 749 | C | 750 | A | 751 | G | 752 | C | 753 | * | G | 724 | A | 725 | C | 726 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCCUUG*CAG | 1 |
| GCAGC*GAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CCUU*A | 1 |
| CAG*A | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Isolated non-canonical cWW pair (1)
- (1)
- Basepair signature
- cWW-L-cWW-L-cWW
- Heat map statistics
- Min 0.64 | Avg 0.32 | Max 0.64
Coloring options: