Motif IL_20530.1 Version IL_20530.1 of this group appears in releases 1.5 to 1.8
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 5-8 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5F_004 | 3U5F | 0 | 1 | 6 | 18S rRNA | G | 42 | A | 43 | U | 44 | U | 45 | A | 46 | G | 48 | * | C | 431 | G | 432 | C | 433 | cWW | ntSs | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUUAAG*CGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUAA*G | 1 |
Release history
| Release | 1.5 | 1.6 | 1.7 | 1.8 |
|---|---|---|---|---|
| Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_20530.1 | Only in the parent motif |
|---|---|---|---|
| IL_91273.1 Compare | IL_3U5F_004 | IL_2AW7_003 |
Children motifs
| Child motif | Common motif instances | Only in IL_20530.1 | Only in the child motif |
|---|---|---|---|
| IL_06211.2 Compare | IL_3U5F_004 | IL_2AW7_003, IL_1FJG_003 |
- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-L-L-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: