#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 71-73-64-5
1 IL_1FJG_0031FJG0.30882A SSU rRNAC47U49A50G52*U359A360G361cWWcWW
2 IL_2AW7_0032AW70.00002A16S ribosomal RNAC47U49A50C52*G359G360G361cWWtSscWW
3 IL_3U5F_0043U5F0.31673618S rRNAG42U45A46G48*C431G432C433cWWntSscWW

3D structures

Complete motif including flanking bases
SequenceCounts
CCUAAG*UAG1
CCUAAC*GGG1
GAUUAAG*CGC1
Non-Watson-Crick part of the motif
SequenceCounts
CUAA*A1
CUAA*G1
AUUAA*G1

Release history

Release1.91.101.11
Date2013-12-072014-01-042014-02-01
StatusUpdated, 2 parentsExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_06211.2Only in the parent motif
IL_06211.1
Compare
IL_2AW7_003, IL_1FJG_003IL_3U5F_004IL_4BPP_004
IL_20530.1
Compare
IL_3U5F_004IL_2AW7_003, IL_1FJG_003

Children motifs

Child motifCommon motif instancesOnly in IL_06211.2Only in the child motif
IL_06211.3
Compare
IL_2AW7_003, IL_1FJG_003IL_3U5F_004IL_4BPP_004
IL_86336.1
Compare
IL_3U5F_004IL_2AW7_003, IL_1FJG_003
Annotations
  • (3)
  • Basepair signature
    cWW-L-tSS-cWW
    Heat map statistics
    Min 0.31 | Avg 0.21 | Max 0.32
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