Motif IL_20608.1 Version IL_20608.1 of this group appears in releases 1.17 to 1.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 1-16 | 4-13 | 5-12 | 6-11 | 8-9 | 14-15 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1VX2_041 | 1VX2 | 0 | 1 | 2 | 18S ribosomal RNA | G | 924 | G | 925 | A | 926 | C | 927 | G | 928 | G | 929 | C | 930 | C | 931 | * | G | 1010 | A | 1011 | A | 1012 | U | 1013 | G | 1014 | U | 1015 | U | 1017 | U | 1018 | ncWW | ncWW | ncWW | cWW | cWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGACGGCC*GAAUGUUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACGGC*AAUGUUU | 1 |
Release history
| Release | 1.17 |
|---|---|
| Date | 2014-09-04 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-cSH-R-L-L-cWS-cWW-bif-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: