Motif IL_20796.1 Version IL_20796.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-3 | 1-5 | 3-4 | 4-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1FJG_012 | 1FJG | 0.0000 | 1 | A | SSU rRNA | U | 249 | A | 250 | U | 252 | * | A | 274 | G | 275 | cWW | cWW | |||
| 2 | IL_1XJR_004 | 1XJR | 0.8637 | 1 | 180 degree turn | A | s2m RNA | G | 28 | A | 29 | C | 31 | * | G | 19 | C | 20 | ncsS | cWW | cWW | ncsS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAGU*AG | 1 |
| GAUC*GC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AG* | 1 |
| AU* | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_20796.1 | Only in the child motif |
|---|---|---|---|
| IL_20796.2 Compare | IL_1FJG_012, IL_1XJR_004 | IL_1FJG_050 |
- Annotations
-
- (1)
- 180 degree turn (1)
- Basepair signature
- Heat map statistics
- Min 0.86 | Avg 0.43 | Max 0.86
Coloring options: