Motif IL_21639.2 Version IL_21639.2 of this group appears in releases 1.17 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-3 | 3-4 | 5-9 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3J7A_065 | 3J7A | 0.3870 | 0 | A | C | 1635 | A | 1636 | U | 1637 | * | A | 1653 | G | 1654 | G | 1655 | A | 1656 | A | 1657 | G | 1658 | cWW | cSH | ncWW | tWH |
| 2 | IL_4BPP_074 | 4BPP | 0.0000 | 0 | A | C | 1359 | U | 1360 | A | 1361 | * | U | 1378 | G | 1379 | G | 1380 | A | 1381 | A | 1382 | G | 1383 | cWW | cWW | tWH | |
| 3 | IL_3U5F_075 | 3U5F | 0.1486 | 0 | 6 | C | 1389 | U | 1390 | A | 1391 | * | U | 1407 | G | 1408 | G | 1409 | A | 1410 | A | 1411 | G | 1412 | cWW | cWW | tWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUA*UGGAAG | 2 |
| CAU*AGGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| U*GGAA | 2 |
| A*GGAA | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in IL_21639.2 | Only in the parent motif |
|---|---|---|---|
| IL_21639.1 Compare | IL_3U5F_075, IL_4BPP_074 | IL_3J7A_065 |
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-tWH-R-R-R-cWW
- Heat map statistics
- Min 0.15 | Avg 0.22 | Max 0.46
Coloring options: