Motif IL_21639.1 Version IL_21639.1 of this group appears in releases 1.5 to 1.15
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 3-4 | 5-9 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_3U5F_075 | 3U5F | 0.0000 | 0 | 6 | 18S rRNA | C | 1389 | U | 1390 | A | 1391 | * | U | 1407 | G | 1408 | G | 1409 | A | 1410 | A | 1411 | G | 1412 | cWW | cWW | tWH |
2 | IL_4BPP_074 | 4BPP | 0.1486 | 0 | A | 18S RRNA | C | 1359 | U | 1360 | A | 1361 | * | U | 1378 | G | 1379 | G | 1380 | A | 1381 | A | 1382 | G | 1383 | cWW | cWW | tWH |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CUA*UGGAAG | 2 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
U*GGAA | 2 |
Release history
Release | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 |
---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
Parent motif | Common motif instances | Only in IL_21639.1 | Only in the parent motif |
---|---|---|---|
IL_28942.1 Compare | IL_3U5F_075 | IL_4BPP_074 | IL_2XZM_076 |
Children motifs
Child motif | Common motif instances | Only in IL_21639.1 | Only in the child motif |
---|---|---|---|
IL_21639.2 Compare | IL_3U5F_075, IL_4BPP_074 | IL_3J7A_065 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-tWH-R-R-R-cWW
- Heat map statistics
- Min 0.15 | Avg 0.07 | Max 0.15
Coloring options: