Motif IL_22025.1 Version IL_22025.1 of this group appears in releases 1.17 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4UN5_001 | 4UN5 | 0.0629 | 2 | A | SGRNA | A | 26 | G | 27 | G | 29 | * | C | 40 | A | 41 | A | 42 | G | 43 | U | 45 | cWW | cWW |
| 2 | IL_4UN3_001 | 4UN3 | 0.0000 | 2 | A | SGRNA | A | 26 | G | 27 | G | 29 | * | C | 40 | A | 41 | A | 42 | G | 43 | U | 45 | cWW | cWW |
| 3 | IL_4OO8_001 | 4OO8 | 0.0944 | 2 | B | RNA (97-MER) | A | 26 | G | 27 | G | 29 | * | C | 40 | A | 41 | A | 42 | G | 43 | U | 45 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGAG*CAAGUU | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GA*AAGU | 3 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in IL_22025.1 | Only in the parent motif |
|---|---|---|---|
| IL_78513.1 Compare | IL_4OO8_001 | IL_4UN3_001, IL_4UN5_001 |
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-R-R-R-cWW
- Heat map statistics
- Min 0.06 | Avg 0.06 | Max 0.10
Coloring options: