Motif IL_78513.1 Version IL_78513.1 of this group appears in releases 1.12 to 1.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4OO8_001 | 4OO8 | 0 | 2 | B | tracrRNA | A | 26 | G | 27 | G | 29 | * | C | 40 | A | 41 | A | 42 | G | 43 | U | 45 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGAG*CAAGUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GA*AAGU | 1 |
Release history
| Release | 1.12 | 1.13 | 1.14 | 1.15 |
|---|---|---|---|---|
| Date | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 |
| Status | New id, no parents | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_78513.1 | Only in the child motif |
|---|---|---|---|
| IL_22025.1 Compare | IL_4OO8_001 | IL_4UN3_001, IL_4UN5_001 |
- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-R-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: