Motif IL_22049.1 Version IL_22049.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3JAM_078 | 3JAM | 0.0000 | 1 | 2 | SSU rRNA | C | 1642 | G | 1643 | C | 1644 | U | 1645 | * | A | 1751 | A | 1752 | A | 1753 | G | 1755 | cWW | ncWWa | cWW | |
| 2 | IL_3J7P_228 | 3J7P | 0.9392 | 1 | Non canonical cWW and near pair (H) | S2 | SSU rRNA | C | 1708 | G | 1709 | C | 1710 | U | 1711 | * | A | 1822 | A | 1823 | A | 1824 | G | 1826 | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGCU*AAAAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GC*AAA | 2 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Non canonical cWW and near pair (H) (1)
- (1)
- Basepair signature
- cWW-L-cSH-cWW-cWW
- Heat map statistics
- Min 0.94 | Avg 0.47 | Max 0.94
Coloring options: