IL_3J7P_228

3D structure

PDB id

3J7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 80S mammalian ribosome bound to eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22049.1

Basepair signature

cWW-L-cSH-cWW-cWW

Number of instances in this motif group

2

Unit IDs

3J7P|1|S2|C|1708
3J7P|1|S2|G|1709
3J7P|1|S2|C|1710
3J7P|1|S2|U|1711
*
3J7P|1|S2|A|1822
3J7P|1|S2|A|1823
3J7P|1|S2|A|1824
3J7P|1|S2|A|1825
3J7P|1|S2|G|1826

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain 4

Eukaryotic elongation factor 2

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain SX

Ribosomal protein uS12

Chain Se

Ribosomal protein eS30

Chain n

Ribosomal protein eL41