Motif IL_22368.1 Version IL_22368.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-5 | 3-10 | 6-9 | 7-8 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1VX6_094 | 1VX6 | 0 | 0 | A | 28S ribosomal RNA | U | 2497 | U | 2498 | G | 2499 | A | 2500 | A | 2501 | U | 2502 | G | 2503 | * | C | 2528 | G | 2529 | C | 2530 | A | 2531 | cWW | cWW | ncSW | ncWW | cSW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUGAAUG*CGCA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAAU*GC | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_22368.1 | Only in the parent motif |
|---|---|---|---|
| IL_44847.1 Compare | IL_1VX6_094 | IL_1VX2_047 |
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-L-L-L-cSW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: