#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 71-72-63-64-5
1 IL_6VMY_0016VMY0.89810ACobalamin riboswitchU219C220C221G222*C230A231G232cWWntWHcWW
2 IL_7MLW_0077MLW0.69021FGuanidine-I riboswitchG89A90A91A92*U73G75C76cWWcWWcWW
3 IL_4PHY_0034PHY0.62571A+BRNA (26-MER) + RNA (20-mer)G17A18U19C20*G31A33C34cWWcWwncWW
4 IL_4KR6_0024KR60.00008DRNA (39-MER)C25A26A27G28*U8U16G18cWWncWWcWW
5 IL_2O3V_0032O3V0.39342B+ARNA (23-mer)C30G31C32U33*A15A17G19cWWcWScWW
6 IL_3MEI_0043MEI0.45232B+ARNA (23-mer)C7G8C9C10*G13C15G17cWWcWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
UCCG*CAG1
GAAA*UCGC1
GAUC*GAAC1
CAAG*UAGUGUCCUUG1
CGCU*AAAAG1
CGCC*GCCUG1
Non-Watson-Crick part of the motif
SequenceCounts
CC*A1
AA*CG1
AU*AA1
AA*AGUGUCCUU1
GC*AAA1
GC*CCU1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (6)
  • Basepair signature
    cWW-L-R-L-cWW
    Heat map statistics
    Min 0.17 | Avg 0.56 | Max 0.99
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