Motif IL_22611.1 Version IL_22611.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-5 | 3-4 | 6-8 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3ZP8_001 | 3ZP8 | 0.0000 | 0 | A+B | HAMMERHEAD RIBOZYME, ENZYME STRAND + HAMMERHEAD RIBOZYME, SUBSTRATE STRAND | A | 3 | U | 4 | G | 5 | * | C | 14 | C | 15 | A | 16 | A | 17 | U | 18 | cWW | cWW | cWW | ||
| 2 | IL_4PDB_001 | 4PDB | 0.9393 | 0 | Other IL | I | SELEX RNA aptamer | C | 28 | A | 29 | G | 30 | * | C | 9 | A | 10 | G | 11 | U | 12 | G | 13 | cWW | cWw | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUG*CCAAU | 1 |
| CAG*CAGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| U*CAA | 1 |
| A*AGU | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_22611.1 | Only in the parent motif |
|---|---|---|---|
| IL_06413.1 Compare | IL_3ZP8_001 | IL_4PDB_001 | IL_4A1B_119 |
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Other IL (1)
- Basepair signature
- cWW-R-R-cWW-cWW
- Heat map statistics
- Min 0.94 | Avg 0.47 | Max 0.94
Coloring options: