Motif IL_22615.1 Version IL_22615.1 of this group appears in releases 3.48 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 1-22 | 2-21 | 5-10 | 6-9 | 7-8 | 13-14 | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_281 | 5J7L | 0.0000 | 2 | DA | LSU rRNA | G | 1024 | G | 1025 | G | 1026 | A | 1027 | A | 1028 | A | 1029 | C | 1030 | * | G | 1124 | G | 1125 | A | 1126 | G | 1128 | A | 1129 | G | 1131 | U | 1132 | A | 1133 | A | 1134 | C | 1135 | G | 1136 | G | 1137 | G | 1138 | G | 1139 | C | 1140 | cWW | tWW | tHH | tHS | cWW | cSH |
| 2 | IL_4WF9_040 | 4WF9 | 0.2391 | 2 | X | LSU rRNA | G | 1068 | G | 1069 | A | 1070 | A | 1071 | A | 1072 | A | 1073 | G | 1074 | * | C | 1168 | G | 1169 | A | 1170 | A | 1172 | A | 1173 | G | 1175 | U | 1176 | A | 1177 | C | 1178 | C | 1179 | G | 1180 | G | 1181 | G | 1182 | G | 1183 | C | 1184 | cWW | tWW | tHH | tHS | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGGAAAC*GGAAGAUGUAACGGGGC | 1 |
| GGAAAAG*CGAAAAUGUACCGGGGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGAAA*GAAGAUGUAACGGGG | 1 |
| GAAAA*GAAAAUGUACCGGGG | 1 |
Release history
| Release | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tWW-L-tWH-R-R-R-R-cSH-R-R-L-tHH-tHS-cWW
- Heat map statistics
- Min 0.24 | Avg 0.12 | Max 0.24
Coloring options: