Motif IL_22678.1 Version IL_22678.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 1-14 | 2-13 | 3-12 | 6-9 | 7-8 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1FJG_049 | 1FJG | 0.0000 | 0 | A | SSU rRNA | U | 1247 | A | 1248 | C | 1249 | A | 1250 | A | 1251 | A | 1252 | G | 1253 | * | C | 1284 | A | 1285 | A | 1286 | A | 1287 | A | 1288 | A | 1289 | G | 1290 | cWW | ntWH | tWH | tWW | cWW |
| 2 | IL_3J9W_048 | 3J9W | 0.3232 | 0 | AA | SSU rRNA | A | 1256 | A | 1257 | C | 1258 | A | 1259 | A | 1260 | A | 1261 | G | 1262 | * | C | 1293 | A | 1294 | C | 1295 | A | 1296 | A | 1297 | A | 1298 | U | 1299 | cWW | tWH | tWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UACAAAG*CAAAAAG | 1 |
| AACAAAG*CACAAAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACAAA*AAAAA | 1 |
| ACAAA*ACAAA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tWH-tWH-L-R-R-L-tWW-cWW
- Heat map statistics
- Min 0.32 | Avg 0.16 | Max 0.32
Coloring options: