Motif IL_25186.1 Version IL_25186.1 of this group appears in releases 3.77 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 3-8 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3BNN_007 | 3BNN | 0.0000 | 1 | D+C | A site of human ribosome | C | 5 | A | 6 | C | 7 | C | 8 | C | 9 | * | G | 12 | A | 13 | C | 14 | A | 15 | G | 17 | cWW | ncWWa | cWW | |
| 2 | IL_7Q80_002 | 7Q80 | 0.1768 | 1 | B+C | RNA 2 + RNA 3 | G | 14 | A | 15 | C | 16 | C | 17 | C | 18 | * | G | 30 | A | 31 | C | 32 | A | 33 | C | 35 | cWW | cWW | ||
| 3 | IL_7Q82_002 | 7Q82 | 0.2319 | 1 | B+C | RNA 2 + RNA 3 | G | 14 | A | 15 | C | 16 | C | 17 | C | 18 | * | G | 30 | A | 31 | C | 32 | A | 33 | C | 35 | cWW | ncWWa | cWW | |
| 4 | IL_7V9E_002 | 7V9E | 0.2987 | 1 | A | RNA (68-MER) | G | 12 | A | 13 | C | 14 | C | 15 | C | 16 | * | G | 33 | A | 34 | C | 35 | A | 36 | C | 38 | cWW | ncWWa | cWW | |
| 5 | IL_3BNN_006 | 3BNN | 0.2431 | 1 | C+D | A site of human ribosome | C | 5 | A | 6 | C | 7 | C | 8 | C | 9 | * | G | 12 | A | 13 | C | 14 | A | 15 | G | 17 | cWW | ncBW | cWWa | cWW |
| 6 | IL_7Q80_004 | 7Q80 | 0.2591 | 1 | E+F | RNA 2 + RNA 3 | G | 14 | A | 15 | C | 16 | C | 17 | C | 18 | * | G | 30 | A | 31 | C | 32 | A | 33 | C | 35 | cWW | ncBW | ncWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GACCC*GACAAC | 4 |
| CACCC*GACAAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACC*ACAA | 6 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (6)
- Basepair signature
- cWW-L-R-L-R-cWW-cWW
- Heat map statistics
- Min 0.14 | Avg 0.18 | Max 0.30
Coloring options: