Motif IL_26728.1 Version IL_26728.1 of this group appears in releases 3.77 to 3.83
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-3 | 2-7 | 3-4 | 3-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_7EOG_002 | 7EOG | 0.2505 | 0 | A | Pepper (49-MER) | U | 40 | G | 41 | U | 42 | C | 43 | G | 44 | * | C | 7 | U | 8 | G | 9 | G | 10 | cWW | cSH | cSH | cWw | cWW | |
| 2 | IL_7SZU_002 | 7SZU | 0.0000 | 0 | R | RNA aptamer | U | 21 | G | 22 | U | 23 | C | 24 | G | 25 | * | C | 52 | U | 53 | G | 54 | G | 55 | cWW | cSH | ntSH | ncSH | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUCG*CUGG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUC*UG | 2 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 |
|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cSH-R-cSH-cWW-cWW
- Heat map statistics
- Min 0.25 | Avg 0.13 | Max 0.25
Coloring options: