#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8break 9 101-108-9
1 IL_6PMO_0016PMO0.87171AT-box riboswitch discriminatorG159U160G161G162A163A164C166G167*U185C186cWWcWW
2 IL_4PHY_0014PHY0.00000A+BRNA (26-MER) + RNA (20-mer)C5U6C7C8C9C10A11C12*G40G41cWWcWW
3 IL_5CNR_0015CNR0.19710A+BRNA (16-mer) + RNA (11-mer)C5U6A7C8C9C10A11C12*G40G41cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUGGAACCG*UC1
CUCCCCAC*GG1
CUACCCAC*GG1
Non-Watson-Crick part of the motif
SequenceCounts
UGGAACC*1
UCCCCA*1
UACCCA*1

Release history

Release3.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-L-L-L-L-L-L-cWW
    Heat map statistics
    Min 0.20 | Avg 0.45 | Max 0.95
    Help

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