Motif IL_28666.1 Version IL_28666.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-9 | 2-11 | 3-8 | 4-7 | 5-6 | 6-7 | 9-10 | 10-12 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4R0D_007 | 4R0D | 0.0000 | 1 | A | U | 125 | G | 126 | C | 127 | C | 129 | U | 130 | * | A | 139 | G | 140 | G | 141 | U | 142 | G | 143 | C | 144 | C | 145 | A | 146 | cWW | ncWW | ncWW | ncSH | |||||
| 2 | IL_4W21_038 | 4W21 | 0.9459 | 1 | 5 | G | 745 | A | 746 | A | 747 | G | 749 | U | 750 | * | G | 912 | U | 913 | U | 914 | A | 915 | C | 916 | A | 917 | G | 918 | C | 919 | cWW | ntSH | ntHW | ncWW | ncWW | ncSH | ncWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGCCCU*AGGUGCCA | 1 |
| GAAGGU*GUUACAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCCC*GGUGCC | 1 |
| AAGG*UUACAG | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-R-R-R-R-R-L-L-cWW
- Heat map statistics
- Min 0.95 | Avg 0.47 | Max 0.95
Coloring options: