Motif IL_30294.1 Version IL_30294.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 1-15 | 2-14 | 3-13 | 5-13 | 8-11 | 9-10 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V8P_218 | 4V8P | 0 | 1 | Kink-turn | D1 | LSU rRNA | A | 1244 | U | 1245 | A | 1246 | C | 1247 | G | 1249 | A | 1250 | C | 1251 | A | 1252 | G | 1253 | * | C | 1310 | C | 1311 | G | 1312 | A | 1313 | A | 1314 | U | 1315 | cWW | ncWW | ntsS | ntSH | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUACGGACAG*CCGAAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UACGGACA*CGAA | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Kink-turn (1)
- Basepair signature
- cWW-L-R-tSS-L-tSH-L-R-L-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: