IL_4V8P_218
3D structure
- PDB id
- 4V8P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T.thermophila 60S ribosomal subunit in complex with initiation factor 6.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.52 Å
Loop
- Sequence
- AUACGGACAG*CCGAAU
- Length
- 16 nucleotides
- Bulged bases
- 4V8P|1|D1|G|1248
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_30294.1
- Basepair signature
- cWW-L-R-tSS-L-tSH-L-R-L-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V8P|1|D1|A|1244
4V8P|1|D1|U|1245
4V8P|1|D1|A|1246
4V8P|1|D1|C|1247
4V8P|1|D1|G|1248
4V8P|1|D1|G|1249
4V8P|1|D1|A|1250
4V8P|1|D1|C|1251
4V8P|1|D1|A|1252
4V8P|1|D1|G|1253
*
4V8P|1|D1|C|1310
4V8P|1|D1|C|1311
4V8P|1|D1|G|1312
4V8P|1|D1|A|1313
4V8P|1|D1|A|1314
4V8P|1|D1|U|1315
Current chains
- Chain D1
- 26S RRNA
Nearby chains
- Chain CE
- 60S RIBOSOMAL PROTEIN L9
- Chain CG
- RPLP0
Coloring options: