Motif IL_32730.1 Version IL_32730.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-7 | 3-6 | 4-5 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2ZY6_001 | 2ZY6 | 0.0000 | 0 | tSH-tHW | A | phenylalanyl transfer RNA | A | 7 | U | 8 | A | 9 | G | 10 | * | C | 25 | G | 26 | A | 27 | G | 28 | U | 29 | cWW | tWH | ntHS | cWW |
| 2 | IL_3NDB_007 | 3NDB | 0.6244 | 2 | tSH-tHW | M | SRP RNA | G | 223 | U | 224 | A | 225 | G | 226 | * | C | 192 | G | 193 | A | 194 | C | 197 | C | 198 | cWW | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUAG*CGAGU | 1 |
| GUAG*CGAACCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UA*GAG | 1 |
| UA*GAACC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- tSH-tHW (2)
- Basepair signature
- cWW-R-tWH-tHS-cWW
- Heat map statistics
- Min 0.62 | Avg 0.31 | Max 0.62
Coloring options: