Motif IL_33761.1 Version IL_33761.1 of this group appears in releases 3.95 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1J9H_005 | 1J9H | 0.3503 | 0 | Other IL | A+B | RNA (9-mer) | G | 3 | U | 4 | C | 5 | * | G | 15 | CBR | 16 | cWW | cWW |
| 2 | IL_6CZR_119 | 6CZR | 0.1695 | 1 | Multiple bulged bases | 1a | SSU rRNA | U | 123 | A | 125 | C | 126 | * | G | 227 | G | 228 | cWW | cWW |
| 3 | IL_4LFB_007 | 4LFB | 0.0000 | 1 | Multiple bulged bases | A | SSU rRNA | U | 129 | A | 130 | C | 131 | * | G | 231 | G | 232 | cWW | cWW |
| 4 | IL_8CRE_107 | 8CRE | 0.4696 | 0 | Single bulged A (H) | 1 | LSU rRNA | C | 2597 | A | 2598 | C | 2599 | * | G | 2586 | G | 2587 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAC*GG | 2 |
| GUC*G(CBR) | 1 |
| CAC*GG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GA* | 2 |
| U* | 1 |
| A* | 1 |
Release history
| Release | 3.95 |
|---|---|
| Date | 2025-03-26 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Multiple bulged bases (2)
- Other IL (1)
- Single bulged A (H) (1)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.17 | Avg 0.35 | Max 0.76
Coloring options: