Motif IL_34443.1 Version IL_34443.1 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 1-15 | 2-14 | 3-13 | 4-12 | 5-6 | 6-11 | 7-10 | 8-9 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8OI5_116 | 8OI5 | 0.0575 | 0 | Sarcin-Ricin target in LSU H95; G-bulge | 1 | LSU rRNA | C | 2990 | U | 2991 | U | 2992 | A | 2993 | G | 2994 | U | 2995 | A | 2996 | C | 2997 | * | G | 3002 | G | 3003 | A | 3004 | A | 3005 | C | 3006 | C | 3007 | G | 3008 | cWW | tSH | tHH | cSH | tWH | tHS | cWW | |
| 2 | IL_8GLP_159 | 8GLP | 0.0000 | 0 | Sarcin-Ricin target in LSU H95; G-bulge | L5 | LSU rRNA | C | 4596 | U | 4597 | C | 4598 | A | 4599 | G | 4600 | U | 4601 | A | 4602 | C | 4603 | * | G | 4608 | G | 4609 | A | 4610 | A | 4611 | C | 4612 | C | 4613 | G | 4614 | cWW | tSH | tHH | cSH | tWH | tHS | cWW | |
| 3 | IL_9H3G_129 | 9H3G | 0.0793 | 0 | Sarcin-Ricin target in LSU H95; G-bulge | A | LSU rRNA | C | 3016 | C | 3017 | U | 3018 | A | 3019 | G | 3020 | U | 3021 | A | 3022 | C | 3023 | * | G | 3028 | G | 3029 | A | 3030 | A | 3031 | C | 3032 | C | 3033 | G | 3034 | cWW | cWB | tSH | tHH | cSH | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUAGUAC*GGAACCG | 1 |
| CUCAGUAC*GGAACCG | 1 |
| CCUAGUAC*GGAACCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAGUA*GAACC | 1 |
| UCAGUA*GAACC | 1 |
| CUAGUA*GAACC | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Sarcin-Ricin target in LSU H95; G-bulge (3)
- Basepair signature
- cWW-L-R-tSH-tHH-cSH-tWH-tHS-cWW
- Heat map statistics
- Min 0.06 | Avg 0.05 | Max 0.08
Coloring options: