Motif IL_36381.1 Version IL_36381.1 of this group appears in releases 0.1 to 0.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1NUJ_004 | 1NUJ | 0.0000 | 3 | G+H | C | 22 | C | 23 | C | 27 | * | G | 43 | G | 44 | A | 45 | G | 46 | cWW | ncWW | cWW |
| 2 | IL_1NUJ_001 | 1NUJ | 0.0228 | 3 | A+B | C | 22 | C | 23 | C | 27 | * | G | 43 | G | 44 | A | 45 | G | 46 | cWW | ncWW | cWW |
| 3 | IL_1NUJ_003 | 1NUJ | 0.2008 | 3 | E+F | C | 22 | C | 23 | C | 27 | * | G | 43 | G | 44 | A | 45 | G | 46 | cWW | ncWW | cWW |
| 4 | IL_1NUJ_002 | 1NUJ | 0.2098 | 3 | C+D | C | 22 | C | 23 | C | 27 | * | G | 43 | G | 44 | A | 45 | G | 46 | cWW | ncWW | cWW |
| 5 | IL_3MEI_004 | 3MEI | 0.6312 | 2 | A+B | G | 13 | C | 15 | G | 17 | * | C | 7 | G | 8 | C | 9 | C | 10 | cWW | cSW | cWW |
| 6 | IL_2O3V_003 | 2O3V | 1.5097 | 2 | B+A | C | 30 | G | 31 | U | 33 | * | A | 15 | A | 17 | A | 18 | G | 19 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCGAGC*GGAG | 4 |
| GCCUG*CGCC | 1 |
| CGCU*AAAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGAG*GA | 4 |
| CCU*GC | 1 |
| GC*AAA | 1 |
Release history
| Release | 0.1 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_36381.1 | Only in the child motif |
|---|---|---|---|
| IL_36381.2 Compare | IL_1NUJ_004, IL_3MEI_004, IL_1NUJ_001, IL_1NUJ_002, IL_1NUJ_003 | IL_2O3V_003 | IL_1S72_053 |
| IL_69909.1 Compare | IL_2O3V_003 | IL_1NUJ_004, IL_3MEI_004, IL_1NUJ_001, IL_1NUJ_002, IL_1NUJ_003 |
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