#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 7 81-82-73-64-5
1 IL_5J7L_3275J7L0.44880Other ILDA LSU rRNAC2103C2104U2105U2106*A2183A2184U2185G2186cWWncWWntHSncWW
2 IL_5UNE_0055UNE0.41960tSH-tHWB+ARNA (47-MER)G21C22A23C24*G21C22A23C24cWWntWHncWScWW
3 IL_7LO9_0047LO90.00000A+BChains: A,B,C,D5BU7U8A9G10*C3G4ZAD5A6cWWtWWtHScWW
4 IL_7LO9_0037LO90.26080B+AChains: A,B,C,D5BU7U8A9G10*C3G4ZAD5A6cWWntWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
(5BU)UAG*CG(ZAD)A2
CCUU*AAUG1
GCAC*GCAC1
Non-Watson-Crick part of the motif
SequenceCounts
UA*G(ZAD)2
CU*AU1
CA*CA1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Other IL (1)
  • tSH-tHW (1)
  • Basepair signature
    cWW-L-R-tHS-cWW
    Heat map statistics
    Min 0.26 | Avg 0.31 | Max 0.53
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.3669 s