Motif IL_37181.1 Version IL_37181.1 of this group appears in releases 3.48 to 3.53

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3	break		4		5		6	1-6	2-5	3-4
1	IL_5TBW_103	5TBW	0.5779	0	Isolated non-canonical cWW pair	1	LSU rRNA	G	2824	C	2825	U	2826	*	G	2863	A	2864	U	2865	cWW	cWWa	cWW
2	IL_5J7L_009	5J7L	0.0000	1	Isolated non-canonical cWW pair	AA	SSU rRNA	G	128	A	129	A	131	*	U	231	G	232	C	233	cWW	cWW	cWW
3	IL_4Y4O_218	4Y4O	0.3759	1	Isolated non-canonical cWW pair (H)	2A	LSU rRNA	G	1031	A	1032	G	1034	*	C	1121	G	1122	C	1123	cWW	cWW	cWW
4	IL_5TBW_132	5TBW	0.6790	3	Isolated non-canonical cWW pair	1	LSU rRNA	U	3373	U	3374	C	3378	*	G	3328	U	3329	A	3330	cWW	cwW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GCU*GAU	1
GAAA*UGC	1
GAUG*CGC	1
UUAAGC*GUA	1

Non-Watson-Crick part of the motif

Sequence	Counts
C*A	1
AA*G	1
AU*G	1
UAAG*U	1

Release history

Release	3.48	3.49	3.50	3.51	3.52	3.53
Date	2021-08-18	2021-09-15	2021-10-13	2021-11-10	2021-12-08	2022-01-05
Status	New id, 2 parents	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: Isolated non-canonical cWW pair (3)
Isolated non-canonical cWW pair (H) (1)
Basepair signature: cWW-cWW-cWW
Heat map statistics: Min 0.38 | Avg 0.46 | Max 0.79

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