Motif IL_37181.2 Version IL_37181.2 of this group appears in releases 3.54 to 3.61
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5TBW_103 | 5TBW | 0.6928 | 0 | Isolated non-canonical cWW pair | 1 | LSU rRNA | G | 2824 | C | 2825 | U | 2826 | * | G | 2863 | A | 2864 | U | 2865 | cWW | cWWa | cWW |
| 2 | IL_5J7L_009 | 5J7L | 0.3693 | 1 | Isolated non-canonical cWW pair | AA | SSU rRNA | G | 128 | A | 129 | A | 131 | * | U | 231 | G | 232 | C | 233 | cWW | cWW | cWW |
| 3 | IL_7RQB_041 | 7RQB | 0.0000 | 1 | Isolated non-canonical cWW pair | 1A | LSU rRNA | G | 1031 | A | 1032 | G | 1034 | * | C | 1121 | G | 1122 | C | 1123 | cWW | cWW | cWW |
| 4 | IL_5TBW_132 | 5TBW | 0.5609 | 3 | Isolated non-canonical cWW pair | 1 | LSU rRNA | U | 3373 | U | 3374 | C | 3378 | * | G | 3328 | U | 3329 | A | 3330 | cWW | cwW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCU*GAU | 1 |
| GAAA*UGC | 1 |
| GAUG*CGC | 1 |
| UUAAGC*GUA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| C*A | 1 |
| AA*G | 1 |
| AU*G | 1 |
| UAAG*U | 1 |
Release history
| Release | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 |
|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Isolated non-canonical cWW pair (4)
- Basepair signature
- cWW-cWW-cWW
- Heat map statistics
- Min 0.37 | Avg 0.46 | Max 0.79
Coloring options: