Motif IL_37406.1 Version IL_37406.1 of this group appears in releases 0.7 to 1.13
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-3 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2QBG_053 | 2QBG | 0.0000 | 1 | B | 23S rRNA | U | 1415 | G | 1416 | * | C | 1582 | A | 1583 | C | 1585 | A | 1586 | G | 1587 | cWW | cWW | |
| 2 | IL_3V2F_058 | 3V2F | 0.8932 | 2 | A | 23S Ribosomal RNA | U | 1481 | G | 1482 | * | C | 1506 | A | 1507 | A | 1509|||A | A | 1509|||B | G | 1510 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UG*CAUCAG | 1 |
| UG*CAACAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AUCA | 1 |
| *AACAA | 1 |
Release history
| Release | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_37406.1 | Only in the parent motif |
|---|---|---|---|
| IL_19889.1 Compare | IL_2QBG_053 | IL_3V2F_058 | IL_3UXR_058 |
Children motifs
| Child motif | Common motif instances | Only in IL_37406.1 | Only in the child motif |
|---|---|---|---|
| IL_25771.1 Compare | IL_2QBG_053 | IL_3V2F_058 |
- Annotations
- Basepair signature
- cWW-R-R-R-cWW
- Heat map statistics
- Min 0.89 | Avg 0.45 | Max 0.89
Coloring options: