Motif IL_38420.1 Version IL_38420.1 of this group appears in releases 3.88 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_267 | 5J7L | 0.0000 | 1 | 90 degree turn | DA | LSU rRNA | A | 844 | A | 845||A | U | 847||A | * | A | 933 | U | 934 | cWW | cWW |
| 2 | IL_7A0S_024 | 7A0S | 0.6852 | 0 | 90 degree turn | X | LSU rRNA | U | 942 | U | 943 | A | 944 | * | U | 860 | G | 861 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AU*AAUU | 1 |
| UUA*UG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AU | 1 |
| U* | 1 |
- Annotations
-
- 90 degree turn (2)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.69 | Avg 0.34 | Max 0.69
Coloring options: