Motif IL_38906.1 Version IL_38906.1 of this group appears in releases 4.4 to 4.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 1-10 | 2-9 | 3-6 | 7-8 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9LKF_001 | 9LKF | 0.7253 | 2 | A | Purine riboswitch | C | 32 | G | 33 | U | 34 | U | 36 | C | 37 | U | 38 | A | 39 | * | U | 9 | A | 10 | G | 12 | cWW | tSW | cWW | |
| 2 | IL_6P2H_001 | 6P2H | 0.7173 | 2 | A | Purine riboswitch | A | 45 | G | 46 | C | 47 | U | 49 | C | 50 | C | 51 | A | 52 | * | U | 22 | A | 23 | U | 25 | cWW | tSW | cWW | |
| 3 | IL_9LKE_001 | 9LKE | 0.0000 | 2 | A | Purine riboswitch | C | 32 | G | 33 | U | 34 | U | 36 | C | 37 | U | 38 | A | 39 | * | U | 9 | A | 10 | G | 12 | cWW | tSW | ntWH | cWW |
| 4 | IL_9V4U_001 | 9V4U | 0.1507 | 2 | A | Purine riboswitch | C | 32 | G | 33 | U | 34 | U | 36 | C | 37 | U | 38 | A | 39 | * | U | 9 | A | 10 | G | 12 | cWW | tSW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGUAUCUA*UAAG | 3 |
| AGCCUCCA*UAAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUAUCU*AA | 3 |
| GCCUCC*AA | 1 |
Release history
| Release | 4.4 |
|---|---|
| Date | 2025-12-03 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-tSW-L-cWW-L-L-R
- Heat map statistics
- Min 0.15 | Avg 0.41 | Max 0.74
Coloring options: