Motif IL_39230.1 Version IL_39230.1 of this group appears in releases 0.5 to 0.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-4 | 4-9 | 5-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2QBG_067 | 2QBG | 0 | 1 | B | 23S rRNA | U | 1712 | A | 1713 | G | 1715 | U | 1716 | A | 1717 | G | 1718 | * | U | 1742 | G | 1743 | A | 1744 | A | 1745 | A | 1746 | cWW | tWW | ncSH | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAUGUAG*UGAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGUA*GAA | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_39230.1 | Only in the child motif |
|---|---|---|---|
| IL_87548.1 Compare | IL_2QBG_067 | IL_1FJG_018 |
- Annotations
-
- (1)
- Basepair signature
- 11_cWW-tWW-cSH-tWH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: