Motif IL_40527.1 Version IL_40527.1 of this group appears in releases 0.6 to 1.18

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4		5		6		7		8		9	break		10		11		12		13		14		15	1-15	2-14	3-13	5-13	8-11	9-10
1	IL_4A1B_060	4A1B	0	1		1	26S RRNA	A	1244	U	1245	A	1246	C	1247	G	1249	A	1250	C	1251	A	1252	G	1253	*	C	1310	C	1311	G	1312	A	1313	A	1314	U	1315	cWW	ncWW	ntsS	ntSH	ncWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
AUACGGACAG*CCGAAU	1

Non-Watson-Crick part of the motif

Sequence	Counts
UACGGACA*CGAA	1

Release history

Release	0.6	0.7	0.8	0.9	0.10	0.11	0.12	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12	1.13	1.14	1.15	1.17	1.18
Date	2012-04-02	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-08	2013-05-04	2013-06-01	2013-07-01	2013-08-03	2013-08-31	2013-09-28	2013-11-05	2013-12-07	2014-01-04	2014-02-01	2014-03-01	2014-03-29	2014-04-27	2014-06-20	2014-09-04	2014-10-07
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations
Basepair signature: cWW-L-R-tSS-L-tSH-L-R-L-cWW-cWW
Heat map statistics: Min 0.00 | Avg 0.00 | Max 0.00

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Coloring options: Nucleotide numbers

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