Motif IL_45371.1 Version IL_45371.1 of this group appears in releases 3.77 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_036 | 4V9F | 0.4644 | 0 | 0 | LSU rRNA | A | 965 | U | 966 | U | 967 | G | 968 | * | C | 1000 | U | 1001 | G | 1002 | U | 1003 | cWW | cSW | cWw | cWW |
| 2 | IL_8AF0_003 | 8AF0 | 0.0000 | 0 | D+C | RNA (19-mer) | C | 31 | C | 32 | U | 33 | G | 34 | * | C | 36 | A | 37 | C | 38 | G | 39 | cWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUUG*CUGU | 1 |
| CCUG*CACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UU*UG | 1 |
| CU*AC | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-L-R-cWW
- Heat map statistics
- Min 0.46 | Avg 0.23 | Max 0.46
Coloring options: