Motif IL_45928.1 Version IL_45928.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 3-4 | 5-7 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5AJ0_141 | 5AJ0 | 0.0000 | 0 | A2 | LSU rRNA | G | 4069 | C | 4070 | C | 4071 | * | G | 4077 | G | 4078 | C | 4079 | U | 4080 | cWW | ncWB | cWW | |
| 2 | IL_3J7P_213 | 3J7P | 0.9100 | 3 | S2 | SSU rRNA | U | 1333 | G | 1334 | G | 1335 | * | U | 1492 | C | 1493 | U | 1496 | A | 1498 | cWW | ntSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCC*GGCU | 1 |
| UGG*UCUGUGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| C*GC | 1 |
| G*CUGUG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-bif-R-cWW
- Heat map statistics
- Min 0.91 | Avg 0.46 | Max 0.91
Coloring options: