Motif IL_46034.1 Version IL_46034.1 of this group appears in releases 1.5 to 1.8
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5F_021 | 3U5F | 0.0000 | 1 | 6 | 18S rRNA | G | 363 | G | 364 | G | 365 | * | C | 376 | G | 377 | A | 378 | U | 379 | C | 381 | cWW | cWW |
| 2 | IL_4BPP_019 | 4BPP | 0.1361 | 1 | A | 18S RRNA | G | 354 | A | 355 | G | 356 | * | C | 367 | G | 368 | A | 369 | U | 370 | C | 372 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGG*CGAUUC | 1 |
| GAG*CGAUUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*GAUU | 1 |
| A*GAUU | 1 |
Release history
| Release | 1.5 | 1.6 | 1.7 | 1.8 |
|---|---|---|---|---|
| Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_46034.1 | Only in the parent motif |
|---|---|---|---|
| IL_67735.1 Compare | IL_3U5F_021 | IL_4BPP_019 |
Children motifs
| Child motif | Common motif instances | Only in IL_46034.1 | Only in the child motif |
|---|---|---|---|
| IL_46034.2 Compare | IL_3U5F_021, IL_4BPP_019 | IL_1FJG_063 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-R-R-cWW
- Heat map statistics
- Min 0.14 | Avg 0.07 | Max 0.14
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