Motif IL_48709.1 Version IL_48709.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-2 | 1-6 | 3-6 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3IWN_005 | 3IWN | 0 | 0 | Minor groove platform | A | C-di-GMP riboswitch | A | 51 | A | 52 | A | 53 | C | 54 | * | G | 71 | U | 72 | ncSH | cWW | ncWS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAC*GU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA* | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_48709.1 | Only in the child motif |
|---|---|---|---|
| IL_73000.1 Compare | IL_3IWN_005 | IL_1FJG_039, IL_2AW7_054, IL_2AW7_044, IL_2AW7_013, IL_4A1B_066, IL_2QBG_003, IL_3UCZ_004 |
- Annotations
-
- Minor groove platform (1)
- Basepair signature
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: