Motif IL_49093.1 Version IL_49093.1 of this group appears in releases 3.89 to 3.90

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4		5	break		6		7		8		9	1-9	2-8	5-6
1	IL_8VTW_108	8VTW	0.0000	0		1A	LSU rRNA	C	2870	C	2871	G	2872	A	2873	C	2874	*	G	2843	G	2844	G	2845	G	2846	cWW	cSW	cWW
2	IL_5WTI_001	5WTI	0.6071	1	Other IL	B	RNA (123-MER)	G	0	C	1	A	3	G	4	G	5	*	C	25	A	26	A	27	C	28	cWW	ncWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CCGAC*GGGG	1
GCGAGG*CAAC	1

Non-Watson-Crick part of the motif

Sequence	Counts
CGA*GG	1
CGAG*AA	1

Release history

Release	3.89	3.90
Date	2024-10-09	2024-11-06
Status	New id, 1 parent	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: Other IL (1)
(1)
Basepair signature: cWW-L-R-L-R-L-cWW
Heat map statistics: Min 0.61 | Avg 0.30 | Max 0.61

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