Motif IL_50446.1 Version IL_50446.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-10 | 4-9 | 5-6 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3J9W_030 | 3J9W | 0.0000 | 1 | Kink-turn (H) | AA | SSU rRNA | U | 693 | G | 694 | U | 695 | A | 696 | G | 697 | * | C | 708 | G | 709 | U | 710 | G | 712 | A | 713 | G | 714 | A | 715 | cWW | tSH | tWH | tHS | cWW |
| 2 | IL_4V4Q_215 | 4V4Q | 0.1688 | 1 | Kink-turn (H) | CA | SSU rRNA | U | 684 | G | 685 | U | 686 | A | 687 | G | 688 | * | C | 699 | G | 700 | U | 701 | G | 703 | A | 704 | G | 705 | A | 706 | cWW | tSH | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUAG*CGUAGAGA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUA*GUAGAG | 2 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Kink-turn (H) (2)
- Basepair signature
- cWW-tSH-tWH-tHS-tSS-R-cWW
- Heat map statistics
- Min 0.17 | Avg 0.08 | Max 0.17
Coloring options: